CDS

Accession Number TCMCG057C21145
gbkey CDS
Protein Id XP_018481084.1
Location join(42247235..42248000,42248128..42248256,42248336..42248467,42248589..42248861,42249027..42249112,42249226..42249549,42249641..42249784)
Gene LOC108852091
GeneID 108852091
Organism Raphanus sativus

Protein

Length 617aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018625582.1
Definition PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category Q
Description Retinal pigment epithelial membrane protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction R10557        [VIEW IN KEGG]
KEGG_rclass RC01329        [VIEW IN KEGG]
RC01330        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K17912        [VIEW IN KEGG]
EC 1.13.11.68        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
GOs GO:0001763        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008300        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010223        [VIEW IN EMBL-EBI]
GO:0010346        [VIEW IN EMBL-EBI]
GO:0010436        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016106        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016121        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016701        [VIEW IN EMBL-EBI]
GO:0016702        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0045549        [VIEW IN EMBL-EBI]
GO:0046247        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901334        [VIEW IN EMBL-EBI]
GO:1901336        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901600        [VIEW IN EMBL-EBI]
GO:1901601        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGATCAAAATGTCTCTCCCTCTCCCGCCGAAAATATTTCTTCCACCGTCAAAGTCTCCATCGACTCATCATCACCAAGCTCCGCCACCGCTTGCACCGCCACGCGCTGCCATATCAATAGCTATTCCTGAAACCGGTTTAGGACGTACCGGAACCATCCACGAGGAGTCCACGTCTTCAGCCTTTCGTGACTACCAGTCTTTATTCGTGTCACAACGTTCCGAGACAGTCGAACCGGTAGTAATTAAACCAATAGAAGGCTCAATACCGGTTGATTTCCCTTCCGGTACATATTACTTAGCCGGTCCAGGACTTTTCGAAGACGACCATGGGTCAACGGTGCATCCATTAGACGGTCACGGTTATCTACGTGCTTTTCACATCGACGGAGACAAACGTAAAGCAACGTTCACGGCGAAGTACGTTAAGACTGAAGCTAAACAAGAAGAACACGATCCAGCAACTGACACGTGGCGGTTTACTCACAGAGGTCCTTTCTCGGTGTTAAAAGGTGGGAAACGATTTGGAAACACGAAAGTGATGAAAAACGTGGCGAATACTAGCGTTTTGAAATGGGCTGGGCGGTTGCTTTGTTTATGGGAAGGTGGTGAACCGTATGAGATTGAATCTGGCTCGTTGGATACCGTCGGGAGATTTGACGTCGCGATCAACGGCTGTGATGATGGTGAGACTTCCGACAGAGATGTTGCTGGTCATGATATATGGGACACAGCCGCAGAGTTGTTGAAACCCATACTTCAAGGTGTGTTTAAGATGCCACCAAAACGTTTCTTGTCACATTACAAAATCGATGATCGAAGAAAAAGACTTTTAACGGTGACTTGCAACGCCGAGGATATGCTCTTACCTCGTAGCAACTTCACATTTTGTGAGTATGATTCAGAATTCAAGTTGATGCAAACAAGAGAGTTCAAGATCGATGATCATCTGATGATTCATGATTGGGCCGTCACAGATACTCACTACATACTCTTTGCAAACAGAGTCAAGCTTAATCCAATTGGTTCAATGGCTGCGATGTGTGGGATGTCACCTATGGTATCAGCGTTGTCCTTGAACCCAAGCAACGAGAACTCTCCGATTTATCTTCTCCCAAGATTTTCCGATACATCTATGGGAGGTAGAGACTGGAGAGTACCTGTGGAAGTATCTTCTCAGCTATGGCTAATTCACTCTGGTAACGCTTATGAAACTAGAGAAGATAACGGTGATTTAAAGATTCAAATACAAGCTTCCGCATGCTCATACCGTTGGTTTGATTTTCAGAAAATGTTTGGATATGATTGGCAAAGAAGCAAGCTGGATCCTTCTGTTATGAATCTAAACCACGGCGATGACAAGCTACTCCCTCATCTAGTTAAGGTGTCTATGACCTTGGACGCAATCGGAAACTGCAAGAGCTGTGACGTAGAGCCTTTAAACGGTTGGAACAAGCCATCAGATTTTCCTGTTATCAACTCATCTTGGTCAGGAGAAAAGAACAAGTACATGTACAGTGCATCCTCTTCGGGAACTCGACGTGAACTTCCTCACTTCCCTTTCGACATGGTCGTGAAGTTCGACCTAGACTCTAATACTGTTCGTACTTGGTCTACCGGAGCTAGGAGATTCGTTGGTGAACCCATGTTTGTCCCTAGAAACTCCAATGATGGAGAAGAAGACGATGGTTACATTATAGTCGTCGAGTATGCGGTGTCGGTGGAGAGATGTTTCCTTGTGATTTTGGATGCTAAGAAGATCGGTGAATCTGATGCGGTCGTGACGAGATTAGCGGTTCCGAGGAATTTAACGTTTCCTATGGGTTTTCATGGTTTGTGGACTAGCGATTAA
Protein:  
MMIKMSLPLPPKIFLPPSKSPSTHHHQAPPPLAPPRAAISIAIPETGLGRTGTIHEESTSSAFRDYQSLFVSQRSETVEPVVIKPIEGSIPVDFPSGTYYLAGPGLFEDDHGSTVHPLDGHGYLRAFHIDGDKRKATFTAKYVKTEAKQEEHDPATDTWRFTHRGPFSVLKGGKRFGNTKVMKNVANTSVLKWAGRLLCLWEGGEPYEIESGSLDTVGRFDVAINGCDDGETSDRDVAGHDIWDTAAELLKPILQGVFKMPPKRFLSHYKIDDRRKRLLTVTCNAEDMLLPRSNFTFCEYDSEFKLMQTREFKIDDHLMIHDWAVTDTHYILFANRVKLNPIGSMAAMCGMSPMVSALSLNPSNENSPIYLLPRFSDTSMGGRDWRVPVEVSSQLWLIHSGNAYETREDNGDLKIQIQASACSYRWFDFQKMFGYDWQRSKLDPSVMNLNHGDDKLLPHLVKVSMTLDAIGNCKSCDVEPLNGWNKPSDFPVINSSWSGEKNKYMYSASSSGTRRELPHFPFDMVVKFDLDSNTVRTWSTGARRFVGEPMFVPRNSNDGEEDDGYIIVVEYAVSVERCFLVILDAKKIGESDAVVTRLAVPRNLTFPMGFHGLWTSD